R Bioinformatics Cookbook | Use R and Bioconductor to perform RNAseq, genomics, data visualization, and bioinformatic analysis
Lingua: inglese
Editore: Packt Publishing, 2019
- Brossura
- Nuovo



Condizione: Nuovo
EUR 76,10
Quantità: 5 disponibili
Aggiungi al carrelloDescrizione dell’articolo da parte del venditore
R Bioinformatics Cookbook | Use R and Bioconductor to perform RNAseq, genomics, data visualization, and bioinformatic analysis | Dan Maclean | Taschenbuch | Kartoniert / Broschiert | Englisch | 2019 | Packt Publishing | EAN 9781789950694 | Verantwortliche Person für die EU: Libri GmbH, Europaallee 1, 36244 Bad Hersfeld, gpsr[at]libri[dot]de | Anbieter: preigu Print on Demand.
Codice articolo 122067891
- Titolo
- R Bioinformatics Cookbook | Use R and Bioconductor to perform RNAseq, genomics, data visualization, and bioinformatic analysis
- Autore
- Dan Maclean
- Editore
- Packt Publishing
- Anno di pubblicazione
- 2019
- Condizione
- Neu
- Rilegatura
- Taschenbuch
- Lingua
- inglese
- ISBN 10
- 1789950694
- ISBN 13
- 9781789950694
- Peso dell'articolo
- 593 grammi
- Dimensioni
- 235 x 191 x 18 mm
- Cataloghi dei venditori
- Bücher
Over 60 recipes to model and handle real-life biological data using modern libraries from the R ecosystem
Key Features
- Apply modern R packages to handle biological data using real-world examples
- Represent biological data with advanced visualizations suitable for research and publications
- Handle real-world problems in bioinformatics such as next-generation sequencing, metagenomics, and automating analyses
Book Description
Handling biological data effectively requires an in-depth knowledge of machine learning techniques and computational skills, along with an understanding of how to use tools such as edgeR and DESeq. With the R Bioinformatics Cookbook, you'll explore all this and more, tackling common and not-so-common challenges in the bioinformatics domain using real-world examples.
This book will use a recipe-based approach to show you how to perform practical research and analysis in computational biology with R. You will learn how to effectively analyze your data with the latest tools in Bioconductor, ggplot, and tidyverse. The book will guide you through the essential tools in Bioconductor to help you understand and carry out protocols in RNAseq, phylogenetics, genomics, and sequence analysis. As you progress, you will get up to speed with how machine learning techniques can be used in the bioinformatics domain. You will gradually develop key computational skills such as creating reusable workflows in R Markdown and packages for code reuse.
By the end of this book, you'll have gained a solid understanding of the most important and widely used techniques in bioinformatic analysis and the tools you need to work with real biological data.
What you will learn
- Employ Bioconductor to determine differential expressions in RNAseq data
- Run SAMtools and develop pipelines to find single nucleotide polymorphisms (SNPs) and Indels
- Use ggplot to create and annotate a range of visualizations
- Query external databases with Ensembl to find functional genomics information
- Execute large-scale multiple sequence alignment with DECIPHER to perform comparative genomics
- Use d3.js and Plotly to create dynamic and interactive web graphics
- Use k-nearest neighbors, support vector machines and random forests to find groups and classify data
Who this book is for
This book is for bioinformaticians, data analysts, researchers, and R developers who want to address intermediate-to-advanced biological and bioinformatics problems by learning through a recipe-based approach. Working knowledge of R programming language and basic knowledge of bioinformatics are prerequisites.
Table of Contents
- Performing Quantitative RNAseq
- Finding Genetic Variants With Next-Generation Sequence Data
- Analyzing Gene and Protein Sequence For Domains and Motifs
- Phylogenetic Analysis and Visualisation
- Metagenomics
- Proteomics from Spectrum to Annotation
- Producing Publication and Web-Ready Visualizations
- Working with Databases and Remote Data Sources
- Useful Statistical and Machine Learning Methods in Bioinformatics
- Programming and Analysis with Tidyverse
- Building reusable workflows with packages and objects for code re-use
"Riassunto" può appartenere a un’altra edizione di questo titolo.
Informazioni sull’autore
Professor Dan MacLean has a Ph.D. in molecular biology from the University of Cambridge and gained postdoctoral experience in genomics and bioinformatics at Stanford University in California. Dan is now a Honorary Professor in the School of Computing Sciences at the University of East Anglia. He has worked in bioinformatics and plant pathogenomics, specializing in R and Bioconductor and developing analytical workflows in bioinformatics, genomics, genetics, image analysis, and proteomics at The Sainsbury Laboratory since 2006. Dan has developed and published software packages in R, Ruby, and Python with over 100,000 downloads combined.
"Descrizione articolo" può appartenere a un’altra edizione di questo titolo.
preigu
Osnabrück, Germania
Venditore AbeBooks dal 5 agosto 2024
Tariffe di spedizione da Germania a U.S.A.
| Articolo | Da 60 a 60 giorni lavorativi | Da 60 a 60 giorni lavorativi |
|---|---|---|
| Primo articolo | EUR 70,00 | EUR 70,00 |
Metodi di pagamento
- PayPal
Descrizione dello Store
preigu betreibt einen Onlineversandhandel mit über 1 Mio. Produkten in verschiedenen Sortimenten. Das Kernsortiment besteht aus Büchern, Medien und Spielwaren. Ein gelungenes Einkaufserlebnis ist das Ziel einer jeden Bestellung bei preigu, denn der Kunde und seine Zufriedenheit stehen an erster Stelle. preigu setzt daher auf einen kompetenten Kundenservice, funktionierende Prozesse und schnelle Reaktion.
Specializzazione
Bücher, SpielwarenInformazioni sull’azienda del venditore
preigu GmbH & Co. KG
Lengericher Landstraße 19
Osnabrück, Germania 49078
Condizioni di vendita
About Us
Legal website operator identification:
preigu GmbH & Co. KG
Lengericher Landstr. 19
49078 Osnabrück
Germany
Telephone: +49 (0) 541 / 580 72 84
Email: mail@preigu.de
VAT No: DE 455 380 498
AG Osnabrück - HRA 209647
PhG: preigu Verwaltung GmbH
AG Osnabrück - HRB 221793
CEO: Ansas Meyer
We are neither willing nor obliged to participate in dispute resolution proceedings before consumer arbitration boards.
We are a member of the initiative "FairCommerce" since 30.11.2016.
For more information, see: https://www.haendlerbund.de/de/haendlerbund/interessenvertretung/faircommerce
Diritto di recesso
Instructions for revocation
Right of withdrawal for the sale of goods
Revocation right for consumers
(A ‘consumer' is any natural person who concludes a legal transaction which, to an overwhelming extent, cannot be attributed to either his commercial or independent professional activities.)
Instructions for revocation
Revocation right
You have the right to revoke this contract within 14 days without specifying any reasons.
The revocation period is 14 days with effect from the day,
-
on which you or a third party nominated by you, which is not the carrier, had taken possession of the products, provided you had ordered one or more products within the scope of a standard order and this/these product/products is/are delivered uniformly;
-
on which you or a third party nominated by you, which is not the carrier, had taken possession of the last product, provided you had ordered several products within the scope of a standard order and these products are delivered separately;
-
on which you or a third party nominated by you, which is not the carrier, had taken possession of the last part delivery or the last unit, provided you had ordered a product, which is delivered in several part deliveries or units;
To exercise your right of withdrawal, you must inform us (preigu GmbH & Co. KG, Lengericher Landstr. 19, 49078 Osnabrück, Telephone number: +49 (0) 541 / 580 72 84, E-Mail address: mail@preigu.de) by means of a clear declaration (e.g. a letter sent by post, or an e-mail) of your decision to withdraw from this contract. You can use the attached model withdrawal form for this purpose, which is, however, not mandatory.
You can also exercise your right of withdrawal online by clicking on a button labelled accordingly (such as ‘Withdraw from contract' or similar) on the AbeBooks/ZVAB website. If you use this online function, you will immediately receive a confirmation of receipt on a durable medium (e.g. via email) containing information on the content of the withdrawal notice, as well as the date and time of its receipt.
In order to safeguard the revocation period, it is sufficient that you send the notification about the exercise of the revocation right before the expiry of the revocation period.
Consequences of the revocation
If you revoke this contract, we shall repay all the payments, which we received from you, including the delivery costs (with the exception of additional costs, which arise from that fact that you selected a form of delivery other than the most reasonable standard delivery offered by us), immediately and at the latest within 14 days from the day on which we received the notification about the revocation of this contract from you. We use the same means of payment, which you had originally used during the original transaction, for this repayment unless expressly agreed otherwise with you; you will not be charged any fees owing to this repayment.
We can refuse the repayment until the products are returned to us or until you have furnished evidence that you have sent the products back to us, depending on whichever is earlier.
You must return or transfer the products to us immediately and, in any case, at the latest within 14 days with effect from the day on which you inform us of the revocation of this contract. The deadline is maintained if you send the products before the expiry of the 14 day deadline.
You bear the direct costs for returning the products.
You must pay for any depreciation of the products only if this depreciation can be attributed to any handling with you that was not necessary for checking the condition, features and functionality of the products.
Criteria for exclusion or expiry
The revocation right is not available for contracts
-
for delivery of products, which are not prefabricated and for whose manufacturing an individual selection or stipulation by the consumer is important or which are clearly tailored to the personal requirements of the consumer;
-
for delivery of products, which can spoil quickly or whose use-by date would be exceeded quickly;
-
for delivery of alcoholic drinks, whose price was agreed at the time of concluding the contract, which however can be delivered 30 days after the conclusion of the contract at the earliest and whose current value depends on the fluctuations in the market, on which the entrepreneur has no influence;
-
for delivery of newspapers, periodicals or magazines with the exception of subscription contracts. The revocation right expires prematurely in case of contracts
-
for delivery of sealed products, which are not suitable for return for reasons of health protection or hygiene if their seal has been removed after the delivery;
-
for delivery of products if they have been mixed inseparably with other goods after the delivery, owing to their condition;
-
for delivery of sound or video recording or computer software in a sealed package if the seal has been removed after the delivery.
Specimen - revocation form
(If you wish to revoke the contract, please fill up this form and send it back to us.)
-
To preigu GmbH & Co. KG, Lengericher Landstr. 19, 49078 Osnabrück, Email address: mail@preigu.de :
-
I/we () herewith revoke the contract concluded by me/ us () regarding the purchase of the following products ()/
the provision of the following service () -
Ordered on ()/ received on ()
-
Name of the consumer(s)
-
Address of the consumer(s)
-
Signature of the consumer(s) (only in case of a notification on paper)
-
Date
(*) Cross out the incorrect option.