Computational Science - ICCS 2003

Some of the most challenging problems in science and engineering are being addressed by the integration of computation and science, a research ?eld known as computational science. Computational science plays a vital role in fundamental advances in biology, physics, chemistry, astronomy, and a host of other disciplines. This is through the coordination of computation, data management, access to instrumentation, knowledge synthesis, and the use of new devices. It has an impact on researchers and practitioners in the sciences and beyond. The sheer size of many challenges in computational science dictates the use of supercomputing, parallel and distri- ted processing, grid-based processing, advanced visualization and sophisticated algorithms. At the dawn of the 21st century the series of International Conferences on Computational Science (ICCS) was initiated with a ?rst meeting in May 2001 in San Francisco. The success of that meeting motivated the organization of the - cond meeting held in Amsterdam April 21–24, 2002, where over 500 participants pushed the research ?eld further. The International Conference on Computational Science 2003 (ICCS 2003) is the follow-up to these earlier conferences. ICCS 2003 is unique, in that it was a single event held at two di?erent sites almost opposite each other on the globe – Melbourne, Australia and St. Petersburg, Russian Federation. The conference ran on the same dates at both locations and all the presented work was published in a single set of proceedings, which you hold in your hands right now.

Track on Applications.- A Bayes Algorithm for the Multitask Pattern Recognition Problem - Direct Approach.- The Development of a Virtual Reality Environment to Model the Experience of Schizophrenia.- An Optimization-Based Approach to Patient Grouping for Acute Healthcare in Australia.- Dynamic Parameterization to Simulate DIN Export Due to Gypsy Moth Defoliation.- Multi-model Simulations of Chicken Limb Morphogenesis.- ProtoMcol: A Molecular Dynamics Research Framework for Algorithmic Development.- An Efficient Navigation Method for Virtual Endoscopy Using Volume Ray Casting.- Constructing a Near-Minimal-Volume Computational Box for Molecular Dynamics Simulations with Periodic Boundary Conditions.- Recast of the Outputs of a Deterministic Model to Get a Better Estimate of Water Quality for Decision Makings.- A Fuzzy Approach for Overcurrent Relays Simulation.- A Knowledge-Based Technique for Constraints Satisfaction in Manpower Allocation.- A Symbolic Approach to Vagueness Management.- Development of Multiple Job Execution and Visualization System on ITBL System Infrastructure Software and Its Utilization for Parametric Studies in Environmental Modeling.- A Genetic Algorithm for Predicting RNA Pseudoknot Structures.- Computational Approach to Structural Analysis of Protein-RNA Complexes.- Improved Web Searching through Neural Network Based Index Generation.- Neural Network For Modeling Nonlinear Time Series: A New Approach.- Export Behaviour Modeling Using EvoNF Approach.- Simulation Studies of a Multi-priority Dual Queue (MPDQ) with Preemptive and Non-preemptive Scheduling.- Visualization of Protein-Protein Interaction Networks Using Force-Directed Layout.- Track on Clusters and Grids.- Counting Polyominoes: A Parallel Implementation for Cluster Computing.- Hyper-BLAST: A Parallelized BLAST on Cluster System.- Parallel Superposition for Bulk Synchronous Parallel ML.- visPerf: Monitoring Tool for Grid Computing.- Design and Implementation of Intelligent Scheduler for Gaussian Portal on Quantum Chemistry Grid.- Extensions to Web Service Techniques for Integrating Jini into a Service-Oriented Architecture for the Grid.- Multiple-Level Grid Algorithm for Getting 2D Road Map in 3D Virtual Scene.- Parallelisation of Nonequilibrium Molecular Dynamics Code for Polymer Melts Using OpenMP.- A Fault Tolerance Service for QoS in Grid Computing.- Performing Grid Computation with Enhanced Web Service and Service Invocation Technologies.- Software Architecture and Performance Comparison of MPI/Pro and MPICH.- Virtual and Dynamic Hierarchical Architecture for E-science Grid.- Track on Models and Algorithms.- Algorithmic Entropy, Phase Transition, and Smart Systems.- Computations of Coupled Electronic States in Quantum Dot/Wetting Layer Cylindrical Structures.- Deadlock Free Specification Based on Local Process Properties.- On the Reconfiguration Algorithm for Fault-Tolerant VLSI Arrays.- Automated Generation of Kinetic Chemical Mechanisms Using Rewriting.- Contraction versus Relaxation: A Comparison of Two Approaches for the Negative Cost Cycle Detection Problem.- Direct Method for Solving a Transmission Problem with a Discontinuous Coefficient and the Dirac Distribution.- Track on Web Engineering.- CORBA Based Real-Time Object-Group Platform in Distributed Computing Environments.- Structural Similarity between XML Documents and DTDs.- Web Personalisation with the Cover Coefficient Algorithm.- Infrastructure of an Agile Supply Chain System: A Virtual Agent Modeling Approach.- Track on Networking.- Performance Improvement of Deflection Routing in Optical Burst Switching Networks.- A Performance Evaluation on Qos-Supporting Multicast Protocol over Conventional Multicast Protocol.- Improving the Performance of Multistage Interconnection Networks under Nonuniform Traffic Pattern on Shorter Cycles.- Symmetric Tree Replication Protocol for Efficient Distributed Storage System.- A Group Key Management Supporting Individual Batch Rekeying and Fault Tolerance for Secure Multicast.- Architecture for Internal Communication in Multi-gigabit IP Routers.- Low-Cost Fault-Tolerance Protocol for Large-Scale Network Monitoring.- Telecommunication Network Modeling and Planning Tool on ASP Clusters.- Track on Parallel Methods and Systems.- Fault-Tolerant Routing in Mesh-Connected 2D Tori.- Network-Tree Model and Shortest Path Algorithm.- Parallel Genetic Algorithm for a Flow-Shop Problem with Multiprocessor Tasks.- Performance Variability of Highly Parallel Architectures.- JDOS: A Jini Based Distributed Operating System.- Parallel Blocked Sparse Matrix-Vector Multiplication with Dynamic Parameter Selection Method.- Parallelization of the Discrete Gradient Method of Non-smooth Optimization and Its Applications.- A Parallel Prime Edge-Length Crystallographic FFT.- A Service-Oriented Framework for Parallel Medical Image Reconstruction.- Parallel Implicit Solution of Full Navier-Stokes Equations.- Track on Data Mining.- Application of the Confidence Measure in Knowledge Acquisition Process.- Computational Science and Data Mining.- Data Sharing Model for Sequence Alignment to Reduce Database Retrieve.- Workshop on Parallel Linear Algebra (WoPLA03).- Self-Adapting Software for Numerical Linear Algebra Library Routines on Clusters.- V-Invariant Methods for Generalised Least Squares Problems.- Parallelisation of Sparse Grids for Large Scale Data Analysis.- An Augmented Lanczos Algorithm for the Efficient Computation of a Dot-Product of a Function of a Large Sparse Symmetric Matrix.- Memory Hierarchy Optimizations and Performance Bounds for Sparse A T Ax.- Issues in the Design of Scalable Out-of-Core Dense Symmetric Indefinite Factorization Algorithms.- Application of the Multi-level Parallelism (MLP) Software to a Finite Element Groundwater Program Using Iterative Solvers with Comparison to MPI.- Workshop on Java in Computational Science.- Visual Parameteric Modeler for Rapid Composition of Parameter-Sweep Applications for Processing on Global Grids.- Method Call Acceleration in Embedded Java Virtual Machines.- Jade: A Parallel Message-Driven Java.- Workshop on Computational Earthquake Physics and Solid Earth System Simulation.- Parallel Finite Element Analysis Platform for the Earth Simulator: GeoFEM.- Mantle Convection Modeling with Viscoelastic/Brittle Lithosphere: Numerical and Computational Methodology.- Anisotropic Convection Model for the Earth’s Mantle.- Finite Element Simulation of Stress Evolution in a Frictional Contact System.- Transparent Boundary Conditions for Wave Propagation on Unbounded Domains.- A 2D Numerical Model for Simulating the Physics of Fault Systems.- Strategies for the Detection and Analysis of Space-Time Patterns of Earthquakes on Complex Fault Systems.- Texture Alignment in Simple Shear.- Mechanical Properties of the Earth’s Crust with Self-Similar Distribution of Faults.- Performance Modeling Codes for the QuakeSim Problem Solving Environment.- Interacting Data Services for Distributed Earthquake Modeling.- Apparent Strain Localization and Shear Wave Dispersion in Elastic Fault Gouge with Microrotations.- Efficient Implementation of Complex Particle Shapes in the Lattice Solid Model.- A Method of Hidden Markov Model Optimization for Use with Geophysical Data Sets.- Workshop on Performance Evalution, Modeling, and Analysis of Scientific Applications on Large-Scale Systems.- A Performance Model of Non-deterministic Particle Transport on Large-Scale Systems.- A Compiler Approach to Performance Prediction Using Empirical-Based Modeling.- A Performance Prediction Framework for Scientific Applications.- Identification of Performance Characteristics from Multi-view Trace Analysis.- Compiler Directed Parallelization of Loops in Scale for Shared-Memory Multiprocessors.- A New Data Compression Technique for Event Based Program Traces.- Exploiting Stability to Reduce Time-Space Cost for Memory Tracing.- Workshop on Scientific Visualization and Human-Machine Interaction in a Problem Solving Environment.- Oh Behave! Agents-Based Behavioral Representations in Problem Solving Environments.- JBeanStudio: A Component-Oriented Visual Software Authoring System for a Problem Solving Environment - Supporting Exploratory Visualization -.- Multi-agent Approach for Visualisation of Fuzzy Systems.- Towards Biomedical Problem Solving in a Game Environment.- Learning Surgical Interventions by Navigating in Virtual Reality Case Spaces.- Virtual Reality and Desktop as a Combined Interaction-Visualisation Medium for a Problem-Solving Environment.- Online Trajectory Classification.- Trajectory Mapping for Landmine Detection Training.- A Low-Cost Model Acquisition System for Computer Graphics Applications.- How Many Pixels Do We Need to See Things?.- Bio-Feedback Based Simulator for Mission Critical Training.- Workshop on Innovative Solutions for Grid Computing.- Proposing and Evaluating Allocation Algorithms in a Grid Environment.- Hierarchical Addressing and Routing Mechanisms for Distributed Applications over Heterogeneous Networks.- Active Network Approach to Grid Management.- The PAGIS Grid Application Environment.- Visual Modeler for Grid Modeling and Simulation (GridSim) Toolkit.- Layered Resource Representation in Grid Environment: An Example from VEGA Grid.- TCM-Grid: Weaving a Medical Grid for Traditional Chinese Medicine.